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At least 163 records · Page 9

Distribution of centrality measures on undirected random networks via the cavity method

The Katz centrality of a node in a complex network is a measure of the node’s importance as far as the flow of information across the network is concerned. For ensembles of locally tree-like undirected random graphs, this observable is a random variable. Its full probability distribution is of interest but difficult to handle analytically because of its “global” character and its definition in terms of a matrix inverse. Leveraging a fast Gaussian Belief Propagation-Cavity algorithm to solve linear systems on tree-like structures, we show that i) the Katz centrality of a single instance can be computed recursively in a very fast way, and ii) the probability P ( K ) that a random node in the ensemble of undirected random graphs has centrality K satisfies a set of recursive distributional equations, which can be analytically characterized and efficiently solved using a population dynamics algorithm. We test our solution on ensembles of Erdős-Rényi and Scale Free networks in the locally tree-like regime, with excellent agreement. The analytical distribution of centrality for the configuration model conditioned on the degree of each node can be employed as a benchmark to identify nodes of empirical networks with over- and underexpressed centrality relative to a null baseline. We also provide an approximate formula based on a rank- 1 projection that works well if the network is not too sparse, and we argue that an extension of our method could be efficiently extended to tackle analytical distributions of other centrality measures such as PageRank for directed networks in a transparent and user-friendly way.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Accurate flux predictions using tissue-specific gene expression in plant metabolic modeling

The accurate prediction of complex phenotypes such as metabolic fluxes in living systems is a grand challenge for systems biology and central to efficiently identifying biotechnological interventions that can address pressing industrial needs. The application of gene expression data to improve the accuracy of metabolic flux predictions using mechanistic modeling methods such as flux balance analysis (FBA) has not been previously demonstrated in multi-tissue systems, despite their biotechnological importance. We hypothesized that a method for generating metabolic flux predictions informed by relative expression levels between tissues would improve prediction accuracy. Relative gene expression levels derived from multiple transcriptomic and proteomic datasets were integrated into FBA predictions of a multi-tissue, diel model of Arabidopsis thaliana’s central metabolism. This integration dramatically improved the agreement of flux predictions with experimentally based flux maps from 13 C metabolic flux analysis compared with a standard parsimonious FBA approach. Disagreement between FBA predictions and MFA flux maps was measured using weighted averaged percent error values, and for parsimonious FBA this was 169%–180% for high light conditions and 94%–103% for low light conditions, depending on the gene expression dataset used. This fell to 10%-13% and 9%-11% upon incorporating expression data into the modeling process, which also substantially altered the predicted carbon and energy economy of the plant.

59 BASIC BIOLOGICAL SCIENCES↗

Position-dependent matter density probability distribution function

Here, we introduce the position-dependent probability distribution function (PDF) of the smoothed matter field as a cosmological observable. In comparison to the PDF itself, the spatial variation of the position-dependent PDF is simpler to model and has distinct dependence on cosmological parameters. We demonstrate that the position-dependent PDF is characterized by variations in the local mean density, and we compute the linear response of the PDF to the local density using separate universe N-body simulations. The linear response of the PDF to the local density field can be thought of as the linear bias of regions of the matter field selected based on density. We provide a model for the linear response, which accurately predicts our simulation measurements. We also validate our results and test the separate universe consistency relation for the local PDF using global universe simulations. We find excellent agreement between the two, and we demonstrate that the separate universe method gives a lower variance determination of the linear response.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Coupling of nTRACER to COBRA-TF for full core high-fidelity analysis of VVERs

The evolution of computing clusters allows the use of high-resolution multi-physics solvers for reactor analysis. Despite the continuous expansion of VVER technology, only one other high-fidelity sub-pin multi-physics core solver is currently developed for safety analysis. To that end the Laboratory of Reactor Physics and Thermal-Hydraulics (LRT) of Paul Scherrer Institut is developing such a tool with the coupling of the neutronic code nTRACER and the sub-channel code COBRA-TF. This work follows the initial steps of the coupling and focuses to the extension of the core solver to full core VVER geometries. The X2 VVER-1000 benchmark is modeled with the novel core solver. The results are compared to the ones of a standalone nTRACER calculation where the feedbacks are provided by a simplified 1D thermal-hydraulic solver. Despite relatively good agreement in power distribution, the limitations of the simplified solver become apparent especially when comparing global temperature profiles. (authors)

21 SPECIFIC NUCLEAR REACTORS AND ASSOCIATED PLANTS↗

Neutron detector response modeling in NOvA

Neutrons can present a significant challenge for neutrino experiments in which energy reconstruction is critical. With the ability to escape detection completely and with a weak correlation between their kinetic energy and any eventual energy deposition, it is difficult to fully account for neutrons produced in neutrino interactions. This in turn leads to significant model dependence when evaluating neutron-related systematic uncertainties. The NOvA experiment is a long-baseline neutrino oscillation experiment with a high-statistics sample of antineutrino data collected by its near detector. We report an excess relative to data of simulated neutron candidates with low energy depositions when using standard Geant4 physics lists. The simulation excess is traced to an overabundance of secondary photons produced from interactions of neutrons with kinetic energy greater than \SI{20}{\mega\eV}. Improved agreement with data is obtained by applying the data-driven neutron-on-carbon \menate model for neutrons between \SI{20}{\mega\eV} and ${\sim}$\SI{100}{\mega\eV}. With \menate, the residual oversimulation is more uniform across the calorimetric neutron energy spectrum, suggesting possible overproduction of primary neutrons by the GENIE neutrino interaction generator. These results motivate the adoption of \menate-supplemented Geant4 simulation as the nominal simulation in the production of future \nova simulation.

Abubakar, S.↗

Field intercomparison of ice nucleation measurements: the Fifth International Workshop on Ice Nucleation Phase 3 (FIN-03)

Abstract. The third phase of the Fifth International Ice Nucleation Workshop (FIN-03) was conducted at the Storm Peak Laboratory in Steamboat Springs, Colorado, in September 2015 to facilitate the intercomparison of instruments measuring ice-nucleating particles (INPs) in the field. Instruments included two online and four offline measurement systems for INPs, which are a subset of those utilized in the laboratory study that comprised the second phase of FIN (FIN-02). The composition of the total aerosols was characterized using the Particle Analysis by Laser Mass Spectrometry (PALMS) and Wideband Integrated Bioaerosol Sensor (WIBS) instruments, and aerosol size distributions were measured by a laser aerosol spectrometer (LAS). The dominant total particle compositions present during FIN-03 were composed of sulfates, organic compounds, and nitrates, as well as particles derived from biomass burning. Mineral-dust-containing particles were ubiquitous throughout and represented 67 % of supermicron particles. Total WIBS fluorescing particle concentrations for particles with diameters of > 0.5 µm were 0.04 ± 0.02 cm−3 (0.1 cm−3 highest; 0.02 cm−3 lowest), typical of the warm season in this region and representing ≈ 9 % of all particles in this size range as a campaign average. The primary focus of FIN-03 was the measurement of INP concentrations via immersion freezing at temperatures > −33 °C. Additionally, some measurements were made in the deposition nucleation regime at these same temperatures, representing one of the first efforts to include both mechanisms within a field campaign. INP concentrations via immersion freezing agreed within factors ranging from nearly 1 to 5 times on average between matched (time and temperature) measurements, and disagreements only rarely exceeded 1 order of magnitude for sampling times coordinated to within 3 h. Comparisons were restricted to temperatures lower than −15 °C due to the limits of detection related to sample volumes and very low INP concentrations. Outliers of up to 2 orders of magnitude occurred between −25 and −18 °C; a better agreement was seen at higher and lower temperatures. Although the 5–10 factor agreement of INP measurements found in FIN-03 aligned with the results of the FIN-02 laboratory comparison phase, giving confidence in progress of this measurement field, this level of agreement still equates to temperature uncertainties of 3.5 to 5 °C that may not be sufficient for numerical cloud modeling applications that utilize INP information. INP activity in the immersion-freezing mode was generally found to be an order of magnitude or more, making it more efficient than in the deposition regime at 95 %–99 % water relative humidity, although this limited data set should be augmented in future efforts. To contextualize the study results, an assessment was made of the composition of INPs during the late-summer to early-fall period of this study inferred through comparison to existing ice nucleation parameterizations and through measurement of the influence of thermal and organic carbon digestion treatments on immersion-freezing ice nucleation activity. Consistent with other studies in continental regions, biological INPs dominated at temperatures of > −20 °C and sometimes colder, while arable dust-like or other organic-influenced INPs were inferred to dominate below −20 °C.

54 ENVIRONMENTAL SCIENCES↗

Understanding the fusion yield dependencies in OMEGA DT-layered implosion experiments using a physics-based statistical mapping model

Improving the performance of inertial confinement fusion implosions requires physics models that can accurately predict the response to changes in the experimental inputs. Good predictive capability has been demonstrated for the fusion yield using a statistical mapping of simulated outcomes to experimental data [Gopalaswamy et al., Nature 565(771), 581–586 (2019)]. In this paper, a physics-based statistical mapping approach is used to extract and quantify all the major sources of degradation of fusion yield for direct-drive implosions on the OMEGA laser. Here, the yield is found to be dependent on the age of the deuterium tritium fill, the ℓ = 1 asymmetry in the implosion core, the laser beam-to-target size ratio, and parameters related to the hydrodynamic stability. A controlled set of experiments were carried out where only the target fill age was varied while keeping all other parameters constant. The measurements were found to be in excellent agreement with the fill age dependency inferred using the mapping model. In addition, a new implosion design was created, guided by the statistical mapping model by optimizing the trade-offs between increased laser energy coupling at larger target size and the degradations caused by the laser beam-to-target size ratio and hydrodynamic instabilities. When experimentally performed, an increased fusion yield was demonstrated in targets with larger diameters.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Experimental and numerical investigation of ester droplet combustion: Application to butyl acetate

This paper presents an experimental and numerical study of the combustion of isolated n–butyl acetate droplets in the standard atmosphere. Numerical simulations are reported using a model that incorporates unsteady gas and liquid transport, variable properties, and radiation. Three skeletal mechanisms of n-butyl acetate, derived from a large detailed mechanism comprised of 819 species and 52,698 reactions, were used in the numerical simulations to evaluate the influence of the kinetic mechanism on burning. The reduced mechanisms comprised 212 species and 5413 reactions, 157 species and 3089 reactions, and 105 species and 1035 reactions. The numerical model did not include soot formation, though qualitatively mild sooting was noted only for droplets larger than 0.7 mm. The numerical predictions were in good agreement with experimental measurements of droplet and flame diameters. Flame extinction was numerically predicted which was attributed to a decrease of the characteristic diffusion time relative to the chemical time as droplet burned. Effects of initial droplet diameter on the evolution of maximum gas temperature (T max ) and peak mole fractions of CO 2 and CO are also examined numerically.

09 BIOMASS FUELS↗

A multishock model for the density variance of anisotropic, highly magnetized, supersonic turbulence

ABSTRACT Shocks form the basis of our understanding for the density and velocity statistics of supersonic turbulent flows, such as those found in the cool interstellar medium (ISM). The variance of the density field, $\sigma ^2_{\rho /\rho _0}$, is of particular interest for molecular clouds (MCs), the birthplaces of stars in the Universe. The density variance may be used to infer underlying physical processes in an MC, and parametrizes the star formation (SF) rate of a cloud. However, models for $\sigma ^2_{\rho /\rho _0}$ all share a common feature – the variance is assumed to be isotropic. This assumption does not hold when a trans-/sub-Alfvénic mean magnetic field, ${B}_0$, is present in the cloud, which observations suggest is relevant for some MCs. We develop an anisotropic model for $\sigma _{\rho /\rho _0}^2$, using contributions from hydrodynamical and fast magnetosonic shocks that propagate orthogonal to each other. Our model predicts an upper bound for $\sigma _{\rho /\rho _0}^2$ in the high Mach number $(\mathcal {M})$ limit as small-scale density fluctuations become suppressed by the strong ${B}_0$. The model reduces to the isotropic $\sigma _{\rho /\rho _0}^2\!-\!\mathcal {M}$ relation in the hydrodynamical limit. To validate our model, we calculate $\sigma _{\rho /\rho _0}^2$ from 12 high-resolution, three-dimensional, supersonic, sub-Alfvénic magnetohydrodynamical (MHD) turbulence simulations and find good agreement with our theory. We discuss how the two MHD shocks may be the bimodally oriented overdensities observed in some MCs and the implications for SF theory in the presence of a sub-Alfvénic ${B}_0$. By creating an anisotropic, supersonic density fluctuation model, this study paves the way for SF theory in the highly anisotropic regime of interstellar turbulence.

Beattie, James R.↗

Ab initio benchmarks of neutrinoless double- β decay in light nuclei with a chiral Hamiltonian

Here, we report ab initio benchmark calculations of nuclear matrix elements (NMEs) for neutrinoless double-β (0νββ) decays in light nuclei with mass numbers ranging from A = 6 to A = 22. We use the transition operator derived from light-Majorana neutrino exchange and evaluate the NME with three different methods: two variants of in-medium similarity renormalization group (IMSRG) and importance-truncated no-core shell model (IT-NCSM). The same two plus three nucleon interaction from chiral effective field theory is employed, and both isospin-conserving (ΔT = 0) and isospin-changing (ΔT = 2) transitions are studied. We compare our resulting ground-state energies and NMEs to those of recent ab initio no-core shell model and coupled-cluster calculations, also with the same inputs. We show that the NMEs of ΔT = 0 transitions are in good agreement among all calculations, at the level of 10%. For ΔT = 2, relative deviations are more significant in some nuclei. The comparison with the exact IT-NCSM result allows us to analyze these cases in detail, and indicates the next steps toward improving the IMSRG-based approaches. The present study clearly demonstrates the power of consistent cross checks that are made possible by ab initio methodology. This capability is crucial for providing meaningful many-body uncertainties in the NMEs for the 0νββ decays in heavier candidate nuclei, where quasiexact benchmarks are not available.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Real-Time Xenon Sensor Analysis Report

Radiotracer release experiments were performed at the Nevada National Security Site in October 2022. The overall experiment was called the RElease ACTivity (REACT) experiment. Twenty-two real-time xenon sensors were deployed for each of four releases. Initial, quick-look analysis results were reported in December 2022. This report reviews the more comprehensive offline analysis effort that was conducted during the remainder of fiscal year 2023 by the Dynamic Networks venture. Improved energy stabilization routines were implemented along with an improved background subtraction routine compared to the original quicklook calculations. The relative detection efficiencies of all real-time sensors were examined. Finally, simulated detector response functions were coupled to two different meteorological models using the measured conditions for the final release (REACT-04) to compare simulated detections with measurements. While there is some agreement between the models and measured data on the detection locations and timing, there is less agreement on the magnitude of those detections. Future sensor and meteorological modeling work will be needed to improve the agreement and to examine the additional releases (REACT-01 through REACT-03).

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

A buoyancy–shear–drag-based turbulence model for Rayleigh–Taylor, reshocked Richtmyer–Meshkov, and Kelvin–Helmholtz mixing

A phenomenological turbulence model for Rayleigh–Taylor, reshocked Richtmyer–Meshkov, and Kelvin–Helmholtz instability-induced mixing is developed using a general buoyancy–shear–drag model. Analytic solutions to the simplified model equations corresponding to each instability are derived separately, which are then used to calibrate the model coefficients to predict specific values of the mixing layer growth parameters and exponents. The buoyancy-shear–drag equations for the bubble and spike mixing layer widths are then solved numerically, and a turbulent diffusivity (or viscosity) is constructed dimensionally as the product of the mixing layer width, h, and its time-derivative, dh/dt. Surrogate turbulent fields are then constructed by multiplying a presumed, approximate self-similar spatial profile by appropriate functions of h and dh/dt. Using several simplifying approximations, the turbulent diffusion equations satisfied by the mean mass fraction and mean shear velocity are solved analytically in a reference frame moving with the mean advection velocity, and it is shown that the mean fields evolve in space and time as expected. The explicit modeling and solution of turbulent transport equations (e.g., for the turbulent kinetic energy and its dissipation rate or a lengthscale) are not required. By using separate equations for the bubble and spike evolution, the model naturally captures the asymmetry induced by an increasing density contrast between the heavy and light fluids. The model also includes molecular dissipation and diffusion, and therefore, can describe transition to fully-developed turbulence if the initial turbulent diffusivity/viscosity is much smaller than the molecular diffusivity/viscosity. This model is applied to constant-acceleration Rayleigh–Taylor, impulsively reshocked Richtmyer–Meshkov, and variable-density Kelvin–Helmholtz mixing layers to demonstrate its utility. It is shown that the numerical solutions of the model calibrated using specific values of the instability growth parameters and exponents: (1) produces mixing layer widths in agreement with the expected self-similar growth power laws; (2) gives spatiotemporal profiles of turbulent fields that are expected and consistent with previous results; (3) predicts the expected power-law growths and decays of the spatially-integrated turbulent fields, and; (4) gives spatiotemporal profiles of the mean fields that are expected and consistent with previous results. This relatively simple model can be implemented numerically, and is expected to be useful for fundamental as well as astrophysical and inertial confinement fusion applications.

42 ENGINEERING↗

Boundary-Layer-Coupled and Decoupled Clouds in Global Storm-Resolving Models: Comparisons With the ARM Observations

The accurate representation of interactions between clouds and planetary boundary layer (PBL) is a persistent challenge in climate models, critical for simulating surface energy budget. The emergence of kilometer-grid-scale global storm resolving models (GSRMs) offers the potential for enhanced details of PBL processes in these complex interactions. This study evaluates the representation of PBL-coupled and decoupled clouds in nine GSRM simulations against extensive ground-based observations by the Department of Energy Atmospheric Radiation Measurement (ARM) program, across six sites encompassing diverse regimes such as marine and continental environments in tropics and midlatitude. By differentiating coupling based on the relative positions between cloud bases and PBL tops, our analysis focuses on the simulation of PBL height, cloud frequency, position and vertical extent. The GSRMs generally exhibit commendable agreements with observed cloud structures and PBL diurnal cycles across different ARM sites. In contrast to the relatively consistent representation of decoupled clouds, discrepancies exist between the simulated and the observed coupled clouds, particularly in areas of intense convection, for example, over tropical rainforests and mountainous regions. These biases are probably associated with the models' tendency to underestimate the boundary layer humidity and the frequency of coupled clouds within different ranges of PBL heights. This study underscores the importance for continuous improvements in the representation of boundary layer and convection within these global kilometer-grid-scale models.

54 ENVIRONMENTAL SCIENCES↗

Gaussian mixture model clustering algorithms for the analysis of high-precision mass measurements

The development of the phase-imaging ion-cyclotron resonance (PI-ICR) technique for use in Penning trap mass spectrometry (PTMS) increased the speed and precision with which PTMS experiments can be carried out. In PI-ICR, data sets of the locations of individual ion hits on a detector are created showing how ions cluster together into spots according to their cyclotron frequency. Ideal data sets would consist of a single, 2D-spherical spot with no other noise, but in practice data sets typically contain multiple spots, non-spherical spots, or significant noise, all of which can make determining the locations of spot centers non-trivial. A method for assigning groups of ions to their respective spots and determining the spot centers is therefore essential for further improving precision and confidence in PI-ICR experiments. Here, we present the class of Gaussian mixture model (GMM) clustering algorithms as an optimal solution. We show that on simulated PI-ICR data, several types of GMM clustering algorithms perform better than other clustering algorithms over a variety of typical scenarios encountered in PI-ICR. The mass spectra of 163Gd, 163 mGd, 162 Tb, and 162 mTb measured using PI-ICR at the Canadian Penning trap mass spectrometer were checked using GMMs, producing results that were in close agreement with the previously published values.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Development of a Griffin model of the advanced test reactor

In the pursuit of a higher fidelity deterministic simulation capability of the Advanced Test Reactor, it is important to have a fast yet accurate deterministic neutronics model. Here, to achieve this, we employed an advanced two-step method. The first step involves generating homogenized cross sections using OpenMC, a cutting-edge Monte Carlo neutron transport code. OpenMC offers excellent modular capabilities, allowing for easy component integration and flexibility in incorporating new designs into the model. The second step involves deterministic transport calculations, which are performed using Griffin, a reactor physics application based on the Multiphysics Object-Oriented Simulation Environment (MOOSE). To ensure the accurate spatial resolution and assignment of material cross sections, a Cubit-generated mesh for the Advanced Test Reactor is utilized as an intermediate step between the OpenMC and Griffin models; Griffin utilizes the mesh for its finite element solution, while OpenMC material identifications are written to the mesh file to be used in Griffin material assignments. Additionally, a Python-based script converts the cross sections generated by OpenMC into the ISOXML format required by Griffin. Initial comparisons using the Griffin diffusion solver indicated good agreement between the neutron multiplication factors obtained from the standalone OpenMC model and the Griffin model, with differences of less than 10 pcm in the 2D geometry configuration; it was later determined that this agreement was likely due to compensating effect and was more likely on the order of –700 pcm relative to the OpenMC solution. However, in three-dimensional calculations, an unacceptably large error (almost 8,000 pcm) was found in the Griffin solution with the diffusion solver. Subsequent calculations using Griffin’s discrete ordinates solver demonstrated substantially improved agreement, within 116 pcm of the OpenMC solution used to generate the cross sections for Griffin. Building on this capability, future work will seek to perform more detailed validation calculations. The ultimate goal is to evaluate both transient and multiphysics simulations of the reactor.

21 SPECIFIC NUCLEAR REACTORS AND ASSOCIATED PLANTS↗

A Comparison of Exact and Model Exchange–Correlation Potentials for Molecules

Accurate exchange–correlation (XC) potentials for three-dimensional systems–via solution of the inverse density functional theory (DFT) problem–are now available to test the quality of DFT approximations. Herein, the exact XC potential for seven molecules–dihydrogen at four different bond-lengths, lithium hydride, water, and ortho-benzyne–are computed from full configuration interaction reference densities. These are compared to model XC potentials from nonlocal (B3LYP, HSE06, SCAN0, and M08-HX) and semilocal/local (SCAN, PBE, and PW92) XC functionals. Whereas for most systems, relative errors in the ground-state densities are O(10 –3 –10 –2 ) , the model XC potentials have much higher errors of O(10 –1 –10 0 ) . Among the model XC functionals, SCAN0 offers the best agreement with the exact XC potential, underlining the significance of satisfying exact conditions as well as including nonlocal effects in XC functionals. This work indicates that tests against the exact XC potential will provide a promising new direction for building more accurate XC functionals for DFT.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Revisiting AMOC Transport Estimates From Observations and Models

Abstract Reference level assumptions used to calculate the Atlantic meridional overturning circulation transports at the RAPID and Meridional Overturning Variability Experiment (MOVE) observing arrays are revisited in an eddying ocean model. Observational transport calculation methods are complemented by several alternative approaches. At RAPID, the model transports from the observational method and the model truth (based on the actual model velocities) agree well in their mean and variability. There are substantial differences among the transport estimates obtained with various methods at the MOVE site. These differences result from relatively large and time‐varying reference velocities at depth in the model, not supporting a level‐of‐no‐motion. The methods that account for these reference velocities properly at MOVE produce transports that are in good agreement with the model truth. In contrast with the observational estimates, the model transport trends at MOVE and RAPID largely agree with each other on pentadal to multi‐decadal time scales.

Danabasoglu, Gokhan↗

Three point amplitudes in matrix theory

We compute the three graviton amplitude in the Banks-Fischler-Shenker-Susskind matrix model for M-theory. Even though the three point amplitude is determined by super Poincare invariance in eleven dimensional M-theory, it requires a non-trivial computation in the matrix model. We consider a configuration where all three gravitons carry non-zero longitudinal momentum. To simplify the problem, we compactify one additional dimension and relate the amplitude to a supersymmetric index computation. Here, we find agreement with the expected answer even at finite values of N.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗