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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 19 records
All sourcesNASA NTRSDOE OSTI
NASA NTRS2017

Network Analysis of Rodent Transcriptomes in Spaceflight

Network analysis methods leverage prior knowledge of cellular systems and the statistical and conceptual relationships between analyte measurements to determine gene connectivity. Correlation and conditional metrics are used to infer a network topology and provide a systems-level context for cellular responses. Integration across multiple experimental conditions and omics domains can reveal the regulatory mechanisms that underlie gene expression. GeneLab has assembled rich multi-omic (transcriptomics, proteomics, epigenomics, and epitranscriptomics) datasets for multiple murine tissues from the Rodent Research 1 (RR-1) experiment. RR-1 assesses the impact of 37 days of spaceflight on gene expression across a variety of tissue types, such as adrenal glands, quadriceps, gastrocnemius, tibalius anterior, extensor digitorum longus, soleus, eye, and kidney. Network analysis is particularly useful for RR-1 -omics datasets because it reinforces subtle relationships that may be overlooked in isolated analyses and subdues confounding factors. Our objective is to use network analysis to determine potential target nodes for therapeutic intervention and identify similarities with existing disease models. Multiple network algorithms are used for a higher confidence consensus.

genomics↗
NASA NTRS1985

Introduction to the Space Physics Analysis Network (SPAN)

The Space Physics Analysis Network or SPAN is emerging as a viable method for solving an immediate communication problem for the space scientist. SPAN provides low-rate communication capability with co-investigators and colleagues, and access to space science data bases and computational facilities. The SPAN utilizes up-to-date hardware and software for computer-to-computer communications allowing binary file transfer and remote log-on capability to over 25 nationwide space science computer systems. SPAN is not discipline or mission dependent with participation from scientists in such fields as magnetospheric, ionospheric, planetary, and solar physics. Basic information on the network and its use are provided. It is anticipated that SPAN will grow rapidly over the next few years, not only from the standpoint of more network nodes, but as scientists become more proficient in the use of telescience, more capability will be needed to satisfy the demands.

Green, J. L.↗
NASA NTRS1975

Stream network analysis and geomorphic flood plain mapping from orbital and suborbital remote sensing imagery application to flood hazard studies in central Texas

The author has identified the following significant results. Development of a quantitative hydrogeomorphic approach to flood hazard evaluation was hindered by (1) problems of resolution and definition of the morphometric parameters which have hydrologic significance, and (2) mechanical difficulties in creating the necessary volume of data for meaningful analysis. Measures of network resolution such as drainage density and basin Shreve magnitude indicated that large scale topographic maps offered greater resolution than small scale suborbital imagery and orbital imagery. The disparity in network resolution capabilities between orbital and suborbital imagery formats depends on factors such as rock type, vegetation, and land use. The problem of morphometric data analysis was approached by developing a computer-assisted method for network analysis. The system allows rapid identification of network properties which can then be related to measures of flood response.

Baker, V. R.↗
NASA NTRSDate not supplied

Examining Artifacts from GLOBE Program Research Symposia & Using Network Analysis Techniques to Characterize Students’ Authentic STEM Investigations

For the past several years, the GLOBE Program's International Virtual Science Symposia (IVSS) and Student Research Symposia (SRS) have provided opportunities for U.S. and international students to present their Earth science research investigations to the GLOBE community through online or in-person events. This presentation will share the techniques and findings of an evaluation study that used student posters and written reports to characterize their research investigations through multiple lenses and frameworks. The study began with a list of characteristics drawn from a literature review, an analysis of sample projects, and several reviews by expert stakeholders and scientists, which comprehensively covered diverse relevant frameworks including citizen science, student STEM learning through authentic experiences, and The GLOBE Program model. Once applied to 207 student projects, this list of codes revealed the frequency and prevalence of various qualities and experiences represented by GLOBE student research investigations. An innovative application of social network analysis techniques to the coded dataset revealed frequently cooccurring characteristics. This networking approach identified and conceptually mapped several "clusters" of characteristics that typified student projects, empirically based on the submitted projects themselves. The basic quantitative investigation of frequencies indicates the extent to which various characteristics are present in - or absent from - GLOBE SRS and IVSS projects, while the network analysis provides a descriptive framework for typifying projects. Ultimately, the descriptive framework fostered a suite of assessment tools to help The GLOBE Program's staff, scientists, and research project judges understand the diversity of student research projects. GLOBE can use these tools to identify and respond to areas of need; for instance, the descriptive framework illustrates the potential for further education and training resources related to data analysis, interpretation of data, and credibility of scientific claims. This presentation will share the novel utilization of network analysis techniques to holistically assess and react to student research contributions.

Ann Martin↗
NASA NTRS1993

Neural networks analysis on SSME vibration simulation data

The neural networks method is applied to investigate the feasibility in detecting anomalies in turbopump vibration of SSME to supplement the statistical method utilized in the prototype system. The investigation of neural networks analysis is conducted using SSME vibration data from a NASA developed numerical simulator. The limited application of neural networks to the HPFTP has also shown the effectiveness in diagnosing the anomalies of turbopump vibrations.

Lo, Ching F.↗
NASA NTRS2017

Gaining the most utility from our geospace observational system: Network analysis of total electron content as a means to understand space weather to the point of prediction

We present the first network analysis of interplanetary magnetic field (IMF) clock angle dependent, high-latitude, hemispheric-specific total electron content (TEC) data. We examine network parameters to describe spatio-temporal correlations in the TEC data for January 2016. We find that significant network structure exists distinguishing the dayside and nightside ionosphere, and specific features in the high-latitudes (cusp/ionospheric footpoints of magnetospheric boundary layers, polar cap, and auroral zone), and that these features vary with IMF clock angle. In this brief summary paper, we provide proof of concept results and identify important areas of future research, providing a basis for the discussion of network analysis and machine learning approaches for space weather applications.

Malik, Nishant↗
NASA NTRS1984

Spacelab data analysis using the space plasma computer analysis network (SCAN) system

The Space-plasma Computer Analysis Network (SCAN) currently connects a large number of U.S. Spacelab investigators into a common computer network. Used primarily by plasma physics researchers at present, SCAN provides access to Spacelab investigators in other areas of space science, to Spacelab and non-Spacelab correlative data bases, and to large Class VI computational facilities for modeling. SCAN links computers together at remote institutions used by space researchers, utilizing commercially available software for computer-to-computer communications. Started by the NASA's Office of Space Science in mid 1980, SCAN presently contains ten system nodes located at major universities and space research laboratories, with fourteen new nodes projected for the near future. The Stanford University computer gateways allow SCAN users to connect onto the ARPANET and TELENET overseas networks.

Green, J. L.↗
DOE OSTI2025

RWRtoolkit: multi-omic network analysis using random walks on multiplex networks in any species

Abstract We introduce RWRtoolkit, a multiplex generation, exploration, and statistical package built for R and command-line users. RWRtoolkit enables the efficient exploration of large and highly complex biological networks generated from custom experimental data and/or from publicly available datasets, and is species agnostic. A range of functions can be used to find topological distances between biological entities, determine relationships within sets of interest, search for topological context around sets of interest, and statistically evaluate the strength of relationships within and between sets. The command-line interface is designed for parallelization on high-performance cluster systems, which enables high-throughput analysis such as permutation testing. Several tools in the package have also been made available for use in reproducible workflows via the KBase web application.

Kainer, David (ORCID:0000000172714676)↗
DOE OSTI2026

Assessing the Application of a Genomic Network Analysis in Population Ecology: Inferring Patterns of Dispersal and Geographic Structure in the Emerging Pathogen, Coccidioides

A challenge in population ecology studies is identifying how to best group individuals into populations, especially when individual origin is unknown. Machine learning has improved upon traditional methods of identifying population structure and is more efficient at handling large, complex datasets. We demonstrate the applicability of a machine learning method to identify hierarchical population structure in an emerging pathogen, Coccidioides spp., the causative agent of Valley fever. We compared the network clusters to structure identified by traditional tools as a validation of the network performance. We used publicly available whole-genome data for 48 C. immitis and 102 C. posadasii, resulting in 168,211 genome-wide SNPs among the two species. The network analysis grouped samples into populations comparable to the literature for these species but also identified fine-scale geographic structure and travel-associated cases not reported thus far. Exploring different resolutions in the network made it easy to identify unique genotypes specific to California and possibly Nevada, as well as Phoenix- and Tucson-acquired infections in non-endemic areas, regardless of reported travel history. The present study provides a promising example of how a ML-based network analysis can improve our ability to understand pathogen ecology, group cases into populations and infer travel-associated infections.

59 BASIC BIOLOGICAL SCIENCES↗
NASA NTRS1989

Space physics analysis network node directory (The Yellow Pages): Fourth edition

The Space Physics Analysis Network (SPAN) is a component of the global DECnet Internet, which has over 17,000 host computers. The growth of SPAN from its implementation in 1981 to its present size of well over 2,500 registered SPAN host computers, has created a need for users to acquire timely information about the network through a central source. The SPAN Network Information Center (SPAN-NIC) an online facility managed by the National Space Science Data Center (NSSDC) was developed to meet this need for SPAN-wide information. The remote node descriptive information in this document is not currently contained in the SPAN-NIC database, but will be incorporated in the near future. Access to this information is also available to non-DECnet users over a variety of networks such as Telenet, the NASA Packet Switched System (NPSS), and the TCP/IP Internet. This publication serves as the Yellow Pages for SPAN node information. The document also provides key information concerning other computer networks connected to SPAN, nodes associated with each SPAN routing center, science discipline nodes, contacts for primary SPAN nodes, and SPAN reference information. A section on DECnet Internetworking discusses SPAN connections with other wide-area DECnet networks (many with thousands of nodes each). Another section lists node names and their disciplines, countries, and institutions in the SPAN Network Information Center Online Data Base System. All remote sites connected to US-SPAN and European-SPAN (E-SPAN) are indexed. Also provided is information on the SPAN tail circuits, i.e., those remote nodes connected directly to a SPAN routing center, which is the local point of contact for resolving SPAN-related problems. Reference material is included for those who wish to know more about SPAN. Because of the rapid growth of SPAN, the SPAN Yellow Pages is reissued periodically.

Peters, David J.↗
NASA NTRS1972

On implicit equations in nonlinear network analysis.

Derivation of conditions for existence of unique solutions to implicit equations of the form y = f(x, u) or x = h(x, u) which are frequently encountered in the analysis of nonlinear networks. The existence of such solutions is demonstrated by applying the principle of contraction mapping and by ascertaining the possibility of a functional inversion according to the Palais (1959) theorem.

Sathe, S. T.↗